CDS

Accession Number TCMCG016C08742
gbkey CDS
Protein Id OMO86924.1
Location complement(join(1552..1630,1738..1806,2464..2543,2646..2744,2863..2941,5440..5517,5852..5893,6006..6103,6210..6314,6817..6924))
Organism Corchorus capsularis
locus_tag CCACVL1_09380

Protein

Length 278aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009364.1
Definition Nucleic acid binding, tRNA/helicase-type [Corchorus capsularis]
Locus_tag CCACVL1_09380

EGGNOG-MAPPER Annotation

COG_category L
Description Replication protein A 32 kDa subunit
KEGG_TC -
KEGG_Module M00288        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10739        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03030        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko03440        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005662        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006269        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030894        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0033260        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035861        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043601        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902295        [VIEW IN EMBL-EBI]
GO:1902318        [VIEW IN EMBL-EBI]
GO:1902969        [VIEW IN EMBL-EBI]
GO:1902981        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGCAGGCGAACGAGTTCGATGGAAACGCGGCGTTTTCCGGCGGCGGATTCATGCCTTCTGAGTCAACCCAGACCGCCCCCGATCGTCCCTTCTCTTCATCTAAAAATAGTGATGCACGGTGCTTGATTCCCCTCACAGTGAAGCAACTGAAGGATCTCTCAAGAGGTGGAGAATCTGGCATTTGCATTGATGGTGTTGATGTCAACAATATTGTGCTTGTTGGGATGGTAACCAAGATAGACAATGCTGTTTCAGATTGTACTTTCAGAGTTGATGATGGCACAGGATGGGTTGAATGCACCAAATGGATTCATGAACAAGTAGACTCAGCTGAAGTAGACAAGATCTTGGTTGGAATGTATGTTCGGGTCTATGGCCAGTTGAAAAGCATCCAAAGTAGAAGGACCTTACACACATTTTGCATTCGGCCTCTTACTGATTTTAATGAGATTGCAAGCCACTTCACCGAGTGTATATATGTTCATCTCTACAACACCAAGTTGCGGGCGCCAAGTTTTACTGGTGGTATGGCCACTCAACCTCAGGTGACAAATTCGTTTGGAAGCAGCCCAATGAAGGGCTACCAAGCTAACCTGTCCAATCAGTTCTCTGGCCAATATAACACTGCTGAAGAACAGATGCTTAATTCAATGGTCTTGAATTACTTGCGTCGAAAACCATGCGTAGAATCTGAAACTGGGGTAGCGTCTTATGTTGTGGCTCGAGACCTAAATATTTCGTTGGATAAAATCAGGAAAGTGTTAGAATTTCTTTCATCTGAGGGCCTCGTCTACACGACCACAGAGGATCACTACAAATTTACTGATGCCTGA
Protein:  
MMQANEFDGNAAFSGGGFMPSESTQTAPDRPFSSSKNSDARCLIPLTVKQLKDLSRGGESGICIDGVDVNNIVLVGMVTKIDNAVSDCTFRVDDGTGWVECTKWIHEQVDSAEVDKILVGMYVRVYGQLKSIQSRRTLHTFCIRPLTDFNEIASHFTECIYVHLYNTKLRAPSFTGGMATQPQVTNSFGSSPMKGYQANLSNQFSGQYNTAEEQMLNSMVLNYLRRKPCVESETGVASYVVARDLNISLDKIRKVLEFLSSEGLVYTTTEDHYKFTDA